PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PK28347.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Cannabis
Family NAC
Protein Properties Length: 269aa    MW: 30479.2 Da    PI: 8.2961
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PK28347.1genomeCCBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.16.2e-35401801128
        NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgyWkat 86 
                lp+G++F+Ptd+el+ ++L+ kv++++++++     +i+++d    i++++P++Lp  v+++    +fF++ +k+y+tg+rk+r+++      + +W++t
  PK28347.1  40 LPAGVKFDPTDQELL-QHLEGKVRSETCKVHPlideFIPTIDgengICYTHPQKLP-GVRKDGLVRHFFHRPSKAYTTGTRKRRKVHtdeeggETRWHKT 137
                799************.99*********5553333443444434445**********.566666788******************744456555778**** PP

        NAM  87 gkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                gk+++v++ +g+++g kk+Lv+y   g+++k+ekt+Wvmh+y+l
  PK28347.1 138 GKTRPVFV-GGRVKGYKKILVLYtnYGKQRKPEKTNWVMHQYHL 180
                ********.9*************6657999999*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-3935199IPR003441NAC domain
PROSITE profilePS5100533.62240199IPR003441NAC domain
PfamPF023656.1E-1641180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MDDDDDEGRK DHNLIIRTCP SCGHQIKCQD KAGIHDLPGL PAGVKFDPTD QELLQHLEGK  60
VRSETCKVHP LIDEFIPTID GENGICYTHP QKLPGVRKDG LVRHFFHRPS KAYTTGTRKR  120
RKVHTDEEGG ETRWHKTGKT RPVFVGGRVK GYKKILVLYT NYGKQRKPEK TNWVMHQYHL  180
GNNEEEKEGE LVVSKVFYQT QPRQCGSVIK DLLNPAKNNN NLRQNDESFV EYSCNIPNSF  240
ISFDHAAQNG GTTPEISVTH FGAGSFLNS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015881279.11e-144PREDICTED: NAC domain-containing protein 73-like
RefseqXP_015881280.11e-144PREDICTED: NAC domain-containing protein 73-like
SwissprotO494591e-121NAC73_ARATH; NAC domain-containing protein 73
TrEMBLW9QV931e-143W9QV93_9R
STRINGPOPTR_0017s04800.11e-142(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF122834108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28500.11e-110NAC domain containing protein 73